Tables
- Table 1 Identified sites of citrullination.
r, citrulline; c, alkylated cysteine; m, oxidized methionine; n or q, deamination; m/z, mass/charge ratio; IO, ionophore; RF, rheumatoid factor.
Protein Modified arginine Peptide sequence Charge m/z Pred. m/z NET ind. ACTB P60709 183 (R)LDLAGrDLTDYLMK(I) 2 812.9162 812.9162 IO 196 (K)ILTErGYSFTTTAER(E) 2 873.4393 873.4389 RF 210 (R)GYSFTTTAErEIVR(D) 3 544.2738 544.2739 RF 2 815.9070 815.9072 RF 256 (R)FrcPEALFQPSFLGMEScGIHETTFNSIMK(C) 3 1179.2135 1179.2100 IO 312 (K)DLYANTVLSGGTTMYPGIADrmQK(E) 3 868.4185 868.4209 IO/RF ACTC P68032 30 (K)AGFAGDDAPrAVFPSIVGRPR(H) 3 719.7115 719.7115 RF 39 (R)AVFPSIVGrPRHQGVMVGMGQK(D) 4 588.8162 588.8161 RF 256 (K)SYELPDGQVITIGNErFR(C) 3 1048.0225 1048.0264 RF 2 699.0182 699.0200 RF ARPC3 O15145 34 (K)GPAPrETKDTDIVDEAIYYFK(A) 3 810.4000 810.4006 IO CDD P32320 5 (K)rPAcTLKPEcVQQLLVcSQEAK(K) 3 873.7701 873.7696 IO 2 1308.6492 1308.6508 IO COR1A P31146 12 (K)FrHVFGQPAKADQcYEDVR(V) 4 581.7795 581.7774 IO 416 (R)rAAPEASGTPSSDAVSRLEEEMR(K) 3 816.3864 816.3871 IO/RF 453 (K)RLDrLEETVQAK(−) 2 729.8989 729.8992 IO CZIB Q9NWV4 58 (R)LMDSVALKGGrGSASMVQK(C) 3 646.0028 646.0045 IO ELMO1 Q92556 405 (R)IVLENSSrEDKHEcPFGR(S) 4 544.2626 544.2628 RF ERH P84090 96 and 97 (K)IYVLLrrQAQQAGK(−) 2 823.4727 823.4728 IO EZR1 P15311 393 (R)AQEEAERLEADrMAALR(A) 3 653.9898 653.9899 IO GDIR1 P52565 49 (K)SIQEIQELDKDDESLrK(Y) 3 683.0105 683.0112 IO HMGB1/2 P09429 24 (K)MSSYAFFVQTcrEEHKK(K) 3 716.9998 716.9996 IO (K)mSSYAFFVQTcrEEHKK(K) 3 722.3307 722.3312 RF HNRPU Q00839 347 (K)VTEKIPVrHLYTK(D) 4 396.9828 396.9832 IO 558 (K)LNTLLQrAPQcLGK(F) 2 806.9442 806.9456 IO 601 (K)McLFAGFQrK(A) 2 629.8071 629.8072 IO HP1B3 Q5SSJ5 269 (K)LEDVLPLAFTrLcEPK(E) 3 634.6734 634.6729 IO 293 and 297 (K)LrVDIrPQLLK(N) 2 676.9167 676.9166 IO HSP90A P07900 355 (R)APFDLFENrK(K) 2 619.3152 619.3142 IO LDHA/B P00338 106/107 (R)QQEGESrLNLVQR(N) 2 779.4013 779.4026 IO LKHA P09960 587 (K)DLAAFDKSHDQAVrTYQEHK(A) 4 590.7869 590.7871 IO MOES P26038 408 (R)QEAEEAKEALLQASrDQK(K) 3 682.3433 682.3430 IO 460 (K)AQMVQEDLEKTrAELK(T) 3 630.6595 630.6594 RF 533 (K)ALTSELANArDESKK(T) 3 545.2847 545.2846 IO MPO H14 P05164 219 (K)rNGFPVALAR(A) 2 551.3118 551.3118 IO MYH9 P35579 1922 and 1923 (K)LrrGDLPFVVPR(R) 3 476.2770 476.2770 RF 1191 (K)TLEEEAKTHEAQIQEMrQK(H) 3 767.3764 767.3778 IO 1751 (R)IAQLEEELEEEQGNTELINDrLK(K) 3 948.1448 948.1487 IO 1830 (K)IAQLEEQLDNETKErQAAcK(Q) 3 792.3874 792.3884 IO 1912 (R)ELEDATETADAMNrEVSSLK(N) 3 737.3418 737.3425 IO NCF1 P14598 85 (K)WFDGQrAAEnRQGTLTEYcSTLMSLPTK(I) 3 1088.1752 1088.1763 IO 85 and 90 (K)WFDGQrAAENrQGTLTEYcSTLMSLPTK(I) 3 1088.1761 1088.1763 IO 340 (R)RqArPGPQSPGSPLEEER(Q) 3 664.9952 664.9960 IO PGM1 P36871 452 (K)DLEALMFDrSFVGK(Q) 3 543.6045 543.6045 RF 2 814.9048 814.9031 IO PLSL P13796 3 (M)ac-ArGSVSDEEMMELR(E) 2 826.8567 825.8664 IO ROA1 P09651 232 (R)SrGFGFVTYATVEEVDAAMNARPHK(V) 4 689.3417 689.3381 IO ROA2 P22626 12 (K)TLETVPLErK(K) 3 396.2277 396.2274 IO S100-A8 P05109 47 (K)LLETEcPQYIrKK(G) 3 560.2991 560.2993 IO (K)LLETEcPQYIrK(K) 2 775.8961 775.8978 IO S10A4 P26447 49 (R)ELPSFLGKrTDEAAFQK(L) 3 646. 6691 646.6707 IO SH3L3 Q9H299 15 (R)VYSTSVTGSrEIKSQQSEVTR(I) 3 781.7313 781.7311 IO (R)VYSTSVTGSrEIK(S) 2 714.3721 714.3725 IO 51 (R)IQYQLVDISQDNALRDEMrALAGNPK(A) 3 987.1703 987.1696 IO SPTB2 Q01082 1307 (K)MLTAQDmSYDEArNLHSK(W) 3 709.6548 709.6542 IO TBA4A P68366 21 and 23 (K)EIIDPVLDrIrK(L) 2 734.9221 734.9221 IO TBB4B/5 P68371 162 (K)IREEYPDrIMNTFSVVPSPK(V) 3 793.3715 793.7386 IO/RF TLN1 Q9Y490 2538 (K)FLPSELrDEH(−) 2 622.3012 622.3013 RF 1625 (R)ALAVNPrDPPSWSVLAGHSR(T) 3 711.0381 711.0461 IO VIME P08670 145 (K)SrLGDLYEEEMRELR(R) 3 500.2326 500.2329 IO 2 948.9588 948.9596 IO 304 (K)FADLSEAANrNNDALR(Q) 2 889.4271 889.4268 RF
