Science Immunology

The PDF file includes:

  • Fig. S1. Inflammatory T cells at site of infection confound a tissue-residency signature.
  • Fig. S2. Controlling for T helper function improves tissue-residency signature.
  • Fig. S3. Protein expression confirms TH1 and TFH phenotypes in the lung.
  • Fig. S4. Progressive differentiation of resident CD4+ T cell subsets.
  • Fig. S5. TRH cell generation requires B cells and T cell–intrinsic Bcl6.
  • Fig. S6. CD4+ TRH cells localize in lung B cell clusters.
  • Fig. S7. Maintenance of TRH cells requires antigen presentation.
  • Fig. S8. TRH cells are plastic and promote local antibody production during rechallenge.
  • Reference (71)

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Other Supplementary Material for this manuscript includes the following:

  • Table S1 (Microsoft Excel format). Raw data file.
  • Table S2 (Microsoft Excel format). List of antibodies used for flow cytometry and histology.
  • Table S3 (Microsoft Excel format). Cluster-defining genes.